Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RPGRQ92834 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RPGRQ92834 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.09■□□□□ 0.81
RPGRQ92834 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.09■□□□□ 0.81
RPGRQ92834 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.09■□□□□ 0.81
RPGRQ92834 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.09■□□□□ 0.81
RPGRQ92834 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
RPGRQ92834 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.09■□□□□ 0.81
RPGRQ92834 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RPGRQ92834 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 AC007613.1-201ENST00000572811 2597 ntBASIC20.09■□□□□ 0.81
RPGRQ92834 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
RPGRQ92834 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.09■□□□□ 0.81
RPGRQ92834 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.09■□□□□ 0.81
RPGRQ92834 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.09■□□□□ 0.81
RPGRQ92834 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.08■□□□□ 0.81
RPGRQ92834 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.08■□□□□ 0.81
RPGRQ92834 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RPGRQ92834 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.08■□□□□ 0.81
RPGRQ92834 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.08■□□□□ 0.81
RPGRQ92834 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RPGRQ92834 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.08■□□□□ 0.81
RPGRQ92834 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPGRQ92834 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.08■□□□□ 0.81
RPGRQ92834 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RPGRQ92834 AC025048.3-201ENST00000590609 569 ntBASIC20.08■□□□□ 0.81
RPGRQ92834 TMEM261P1-201ENST00000604899 340 ntBASIC20.08■□□□□ 0.81
RPGRQ92834 AC005702.4-201ENST00000618393 416 ntBASIC20.08■□□□□ 0.81
RPGRQ92834 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRQ92834 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.08■□□□□ 0.8
RPGRQ92834 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRQ92834 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RPGRQ92834 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRQ92834 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RPGRQ92834 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRQ92834 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.08■□□□□ 0.8
RPGRQ92834 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.08■□□□□ 0.8
RPGRQ92834 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RPGRQ92834 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRQ92834 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPGRQ92834 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RPGRQ92834 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.07■□□□□ 0.8
RPGRQ92834 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRQ92834 PCGF3-213ENST00000620529 1899 ntBASIC20.07■□□□□ 0.8
RPGRQ92834 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRQ92834 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.07■□□□□ 0.8
RPGRQ92834 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RPGRQ92834 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.07■□□□□ 0.8
RPGRQ92834 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.07■□□□□ 0.8
RPGRQ92834 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RPGRQ92834 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.07■□□□□ 0.8
RPGRQ92834 AC104596.2-201ENST00000512793 793 ntBASIC20.07■□□□□ 0.8
RPGRQ92834 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.07■□□□□ 0.8
RPGRQ92834 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.07■□□□□ 0.8
RPGRQ92834 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RPGRQ92834 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.07■□□□□ 0.8
RPGRQ92834 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.07■□□□□ 0.8
RPGRQ92834 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RPGRQ92834 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRQ92834 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
RPGRQ92834 AC068880.1-201ENST00000507289 2297 ntBASIC20.07■□□□□ 0.8
RPGRQ92834 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.07■□□□□ 0.8
RPGRQ92834 AC141586.5-201ENST00000624546 2050 ntBASIC20.07■□□□□ 0.8
RPGRQ92834 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRQ92834 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RPGRQ92834 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRQ92834 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRQ92834 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.07■□□□□ 0.8
RPGRQ92834 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPGRQ92834 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.07■□□□□ 0.8
RPGRQ92834 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRQ92834 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRQ92834 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.06■□□□□ 0.8
RPGRQ92834 CLK3P2-201ENST00000427566 1453 ntBASIC20.06■□□□□ 0.8
RPGRQ92834 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
RPGRQ92834 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RPGRQ92834 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RPGRQ92834 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
RPGRQ92834 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RPGRQ92834 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRQ92834 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.06■□□□□ 0.8
RPGRQ92834 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms