Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 SLC7A15P-201ENST00000424028 1363 ntBASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 ARSEP1-201ENST00000420443 635 ntBASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 AC008494.3-201ENST00000606615 944 ntBASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 AC007431.3-201ENST00000623221 587 ntBASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC25.04■■□□□ 1.6
CCNB3Q8WWL7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 AC005052.1-201ENST00000625181 2492 ntBASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 ME2P1-201ENST00000426028 1970 ntBASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 ALOX12P2-203ENST00000570921 1945 ntBASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 AC087499.6-201ENST00000411576 835 ntBASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 INE1-201ENST00000456273 945 ntBASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCNB3Q8WWL7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 AP006294.1-201ENST00000415407 339 ntBASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 GIMAP3P-201ENST00000495150 836 ntBASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 AC055876.2-201ENST00000531834 546 ntBASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 AL359881.2-201ENST00000602973 570 ntBASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 SRD5A3P1-201ENST00000603021 949 ntBASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC25.02■■□□□ 1.6
CCNB3Q8WWL7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 OSM-203ENST00000403463 464 ntTSL 3 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 ATP5G2P4-201ENST00000442175 420 ntBASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 CD81-207ENST00000481687 890 ntTSL 2 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 5S_rRNA.22-201ENST00000614916 106 ntBASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 AC004461.2-201ENST00000629517 803 ntBASIC25.01■■□□□ 1.59
CCNB3Q8WWL7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms