Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 AC140658.5-201ENST00000438532 169 ntBASIC15.41■□□□□ 0.06
NUP43Q8NFH3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 AC106730.1-201ENST00000566722 1090 ntBASIC15.41■□□□□ 0.06
NUP43Q8NFH3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 LINC02199-201ENST00000506655 2702 ntBASIC15.41■□□□□ 0.06
NUP43Q8NFH3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUP43Q8NFH3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 AC092474.2-201ENST00000424288 719 ntBASIC15.4■□□□□ 0.06
NUP43Q8NFH3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 RNA5SP416-201ENST00000516838 111 ntBASIC15.4■□□□□ 0.06
NUP43Q8NFH3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 AC008741.2-201ENST00000612792 3115 ntBASIC15.4■□□□□ 0.06
NUP43Q8NFH3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.4■□□□□ 0.06
NUP43Q8NFH3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms