Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 AL662844.1-201ENST00000546340 181 ntBASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 AP001005.1-201ENST00000571755 1248 ntBASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZNF439Q8NDP4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 CYP2T1P-202ENST00000641596 2535 ntBASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 AC009078.2-202ENST00000463353 338 ntBASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 IGHV3-22-201ENST00000520721 359 ntBASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 UNC93B6-202ENST00000528242 690 ntBASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF439Q8NDP4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF439Q8NDP4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ZNF439Q8NDP4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF439Q8NDP4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF439Q8NDP4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms