Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 AL592424.1-201ENST00000563624 1536 ntBASIC16.84■□□□□ 0.29
RTL3Q8N8U3 AL589702.1-201ENST00000641229 1509 ntBASIC16.84■□□□□ 0.29
RTL3Q8N8U3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL3Q8N8U3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.83■□□□□ 0.29
RTL3Q8N8U3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTL3Q8N8U3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTL3Q8N8U3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.83■□□□□ 0.29
RTL3Q8N8U3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 CNN2P11-201ENST00000429351 262 ntBASIC16.83■□□□□ 0.28
RTL3Q8N8U3 AC005237.2-201ENST00000434368 219 ntBASIC16.83■□□□□ 0.28
RTL3Q8N8U3 DNAJB3-202ENST00000449667 1266 ntBASIC16.83■□□□□ 0.28
RTL3Q8N8U3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 AC098859.1-201ENST00000502915 1238 ntBASIC16.83■□□□□ 0.28
RTL3Q8N8U3 AC124067.4-201ENST00000519691 2379 ntBASIC16.83■□□□□ 0.28
RTL3Q8N8U3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 UXT-AS1-201ENST00000590504 1525 ntBASIC16.83■□□□□ 0.28
RTL3Q8N8U3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 SPTSSB-204ENST00000617024 1292 ntBASIC16.83■□□□□ 0.28
RTL3Q8N8U3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL3Q8N8U3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 MTHFR-217ENST00000641820 1569 ntBASIC16.82■□□□□ 0.28
RTL3Q8N8U3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 SLC25A39P2-201ENST00000537614 270 ntBASIC16.82■□□□□ 0.28
RTL3Q8N8U3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 SNHG9-202ENST00000564014 471 ntBASIC16.82■□□□□ 0.28
RTL3Q8N8U3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 AL596442.2-201ENST00000610240 980 ntBASIC16.82■□□□□ 0.28
RTL3Q8N8U3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 AC079781.4-201ENST00000641908 219 ntBASIC16.82■□□□□ 0.28
RTL3Q8N8U3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.82■□□□□ 0.28
RTL3Q8N8U3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL3Q8N8U3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL3Q8N8U3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms