Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
PAF1Q8N7H5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
PAF1Q8N7H5 SLC22A20-204ENST00000530038 1673 ntBASIC16.94■□□□□ 0.3
PAF1Q8N7H5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PAF1Q8N7H5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PAF1Q8N7H5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PAF1Q8N7H5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PAF1Q8N7H5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PAF1Q8N7H5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PAF1Q8N7H5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.93■□□□□ 0.3
PAF1Q8N7H5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PAF1Q8N7H5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 HMGA1P7-201ENST00000406908 502 ntBASIC16.92■□□□□ 0.3
PAF1Q8N7H5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 DUX4L17-201ENST00000557360 1267 ntBASIC16.92■□□□□ 0.3
PAF1Q8N7H5 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 AL031055.1-201ENST00000606362 631 ntBASIC16.92■□□□□ 0.3
PAF1Q8N7H5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms