Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 C8orf49-201ENST00000525043 1968 ntBASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf42Q8N5U0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 AC092919.2-201ENST00000623631 1645 ntBASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf42Q8N5U0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 KRT8P39-201ENST00000396270 1433 ntBASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 YBX2P1-201ENST00000394192 760 ntBASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 AC140658.5-201ENST00000438532 169 ntBASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 AC002347.1-201ENST00000569543 541 ntBASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 AP002472.1-201ENST00000577490 586 ntBASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 AP001350.2-201ENST00000625104 1094 ntBASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf42Q8N5U0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms