Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCN4BQ8IWT1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 FAM220BP-201ENST00000377689 816 ntBASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 AC093724.1-201ENST00000448659 1027 ntBASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 AC069120.2-201ENST00000524091 540 ntBASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SCN4BQ8IWT1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 GGT3P-204ENST00000453783 1664 ntBASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCN4BQ8IWT1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 NFIC-211ENST00000641145 8399 ntBASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 SPCS2P1-201ENST00000561636 679 ntBASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 AC092364.2-202ENST00000597012 1073 ntBASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 AL390754.1-201ENST00000619088 582 ntBASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCN4BQ8IWT1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms