Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 MIR346-201ENST00000362234 95 ntBASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 IGHV3-62-201ENST00000520057 340 ntBASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 AC006449.6-201ENST00000612330 2296 ntBASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CBWD2Q8IUF1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 AL592424.1-201ENST00000563624 1536 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 AL589702.1-201ENST00000641229 1509 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 RPS8P6-201ENST00000426177 609 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 DNAJB3-202ENST00000449667 1266 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 AP000344.2-201ENST00000512987 629 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 SLC25A39P2-201ENST00000537614 270 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 AL596442.2-201ENST00000610240 980 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 AL691403.2-201ENST00000618460 490 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 AC139530.3-201ENST00000620344 690 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 CYP2T1P-202ENST00000641596 2535 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 UXT-AS1-201ENST00000590504 1525 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 U82695.1-201ENST00000635752 1889 ntBASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CBWD2Q8IUF1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 AL627223.1-201ENST00000416693 442 ntBASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 FAM58DP-201ENST00000428076 619 ntBASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 AC005237.2-201ENST00000434368 219 ntBASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.81■□□□□ 0.44
CBWD2Q8IUF1 KRT8P23-201ENST00000560090 1207 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms