Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 AL356488.2-201ENST00000602755 427 ntBASIC16.84■□□□□ 0.29
CASC4Q6P4E1 AC008667.4-201ENST00000607370 168 ntBASIC16.84■□□□□ 0.29
CASC4Q6P4E1 AC008735.5-201ENST00000623544 497 ntBASIC16.84■□□□□ 0.29
CASC4Q6P4E1 AC005593.1-201ENST00000624894 515 ntBASIC16.84■□□□□ 0.29
CASC4Q6P4E1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 AC007950.2-201ENST00000615045 2347 ntBASIC16.84■□□□□ 0.29
CASC4Q6P4E1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CASC4Q6P4E1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CASC4Q6P4E1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CASC4Q6P4E1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CASC4Q6P4E1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 HCG4-201ENST00000418983 998 ntBASIC16.83■□□□□ 0.28
CASC4Q6P4E1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 DUSP5P1-201ENST00000441325 1139 ntBASIC16.83■□□□□ 0.28
CASC4Q6P4E1 EMBP1-201ENST00000458200 901 ntBASIC16.83■□□□□ 0.28
CASC4Q6P4E1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 AF186996.4-201ENST00000467186 377 ntBASIC16.83■□□□□ 0.28
CASC4Q6P4E1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 AC105339.3-201ENST00000560043 636 ntBASIC16.83■□□□□ 0.28
CASC4Q6P4E1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 TP73-AS1-207ENST00000624167 988 ntBASIC16.83■□□□□ 0.28
CASC4Q6P4E1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.83■□□□□ 0.28
CASC4Q6P4E1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 AC006449.6-201ENST00000612330 2296 ntBASIC16.82■□□□□ 0.28
CASC4Q6P4E1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 AL139384.1-201ENST00000612143 3047 ntBASIC16.82■□□□□ 0.28
CASC4Q6P4E1 AP002414.3-201ENST00000589352 1468 ntBASIC16.82■□□□□ 0.28
CASC4Q6P4E1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CASC4Q6P4E1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms