Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL512652.2-201ENST00000625156 1716 ntBASIC15.02□□□□□ -0.01
NIPAL3Q6P499 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 AC006449.6-201ENST00000612330 2296 ntBASIC15.01□□□□□ -0.01
NIPAL3Q6P499 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 AL031731.1-201ENST00000642131 2094 ntBASIC15.01□□□□□ -0.01
NIPAL3Q6P499 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 AC107918.2-201ENST00000530817 355 ntBASIC15.01□□□□□ -0.01
NIPAL3Q6P499 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 AC145285.3-201ENST00000564603 959 ntBASIC15.01□□□□□ -0.01
NIPAL3Q6P499 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 OR7E47P-204ENST00000575924 449 ntBASIC15.01□□□□□ -0.01
NIPAL3Q6P499 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.01□□□□□ -0.01
NIPAL3Q6P499 LINC00554-201ENST00000564841 3011 ntBASIC15.01□□□□□ -0.01
NIPAL3Q6P499 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 ZNF259P1-201ENST00000407656 1365 ntBASIC15□□□□□ -0.01
NIPAL3Q6P499 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15□□□□□ -0.01
NIPAL3Q6P499 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NIPAL3Q6P499 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 VN2R19P-201ENST00000442399 1052 ntBASIC15□□□□□ -0.01
NIPAL3Q6P499 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 SLC25A1P1-201ENST00000528351 927 ntBASIC15□□□□□ -0.01
NIPAL3Q6P499 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15□□□□□ -0.01
NIPAL3Q6P499 CD63-210ENST00000550776 870 ntTSL 5 BASIC15□□□□□ -0.01
NIPAL3Q6P499 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15□□□□□ -0.01
NIPAL3Q6P499 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15□□□□□ -0.01
NIPAL3Q6P499 AC034105.1-201ENST00000563488 319 ntBASIC15□□□□□ -0.01
NIPAL3Q6P499 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15□□□□□ -0.01
NIPAL3Q6P499 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15□□□□□ -0.01
NIPAL3Q6P499 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15□□□□□ -0.01
NIPAL3Q6P499 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15□□□□□ -0.01
NIPAL3Q6P499 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NIPAL3Q6P499 CYP51A1P2-201ENST00000419457 1499 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms