Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 AC234783.1-201ENST00000441761 496 ntBASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 AC025048.3-201ENST00000590609 569 ntBASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 AC005702.4-201ENST00000618393 416 ntBASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 AL033527.4-201ENST00000641026 673 ntBASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 FO393414.2-201ENST00000405153 598 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 KRT223P-202ENST00000449164 1292 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 SNX29P1-201ENST00000548357 1007 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 RARRES2P5-201ENST00000564013 466 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 AC015936.2-201ENST00000593177 259 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 AC008735.3-201ENST00000596646 500 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 MIR8072-201ENST00000614241 80 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 MIR6775-201ENST00000617557 69 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 AL033527.5-201ENST00000641382 801 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 AC099398.1-201ENST00000567919 2776 ntBASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDCP2Q5VXM1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 HIST3H2BA-201ENST00000436555 524 ntBASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 TIMM17BP1-201ENST00000545713 516 ntBASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.48■□□□□ 0.07
CDCP2Q5VXM1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms