Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
TTC39BQ5VTQ0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC39BQ5VTQ0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 SNX33P1-201ENST00000592116 1762 ntBASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 CNN2P11-201ENST00000429351 262 ntBASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 AC022145.2-201ENST00000598203 171 ntBASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 AC004835.2-201ENST00000603762 682 ntBASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TTC39BQ5VTQ0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms