Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 AC009407.1-201ENST00000568958 598 ntBASIC17.35■□□□□ 0.37
VARS2Q5ST30 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 AC004223.2-201ENST00000590309 544 ntBASIC17.35■□□□□ 0.37
VARS2Q5ST30 MIR6752-201ENST00000618442 71 ntBASIC17.35■□□□□ 0.37
VARS2Q5ST30 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 LINC01144-201ENST00000626198 1710 ntBASIC17.35■□□□□ 0.37
VARS2Q5ST30 AC005622.1-201ENST00000636801 1703 ntBASIC17.35■□□□□ 0.37
VARS2Q5ST30 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.35■□□□□ 0.37
VARS2Q5ST30 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VARS2Q5ST30 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 AC099398.1-201ENST00000567919 2776 ntBASIC17.34■□□□□ 0.37
VARS2Q5ST30 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 MEIS3P1-201ENST00000495167 958 ntBASIC17.34■□□□□ 0.37
VARS2Q5ST30 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 UBALD1-205ENST00000590891 2641 ntBASIC17.34■□□□□ 0.37
VARS2Q5ST30 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VARS2Q5ST30 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VARS2Q5ST30 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
VARS2Q5ST30 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
VARS2Q5ST30 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
VARS2Q5ST30 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
VARS2Q5ST30 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VARS2Q5ST30 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.33■□□□□ 0.37
VARS2Q5ST30 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.33■□□□□ 0.37
VARS2Q5ST30 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.33■□□□□ 0.37
VARS2Q5ST30 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
VARS2Q5ST30 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VARS2Q5ST30 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.33■□□□□ 0.36
VARS2Q5ST30 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VARS2Q5ST30 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
VARS2Q5ST30 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VARS2Q5ST30 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VARS2Q5ST30 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VARS2Q5ST30 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.33■□□□□ 0.36
VARS2Q5ST30 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.33■□□□□ 0.36
VARS2Q5ST30 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC17.33■□□□□ 0.36
VARS2Q5ST30 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
VARS2Q5ST30 AC008738.7-201ENST00000609744 511 ntBASIC17.33■□□□□ 0.36
VARS2Q5ST30 AL358472.5-202ENST00000641448 1267 ntBASIC17.33■□□□□ 0.36
VARS2Q5ST30 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VARS2Q5ST30 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VARS2Q5ST30 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VARS2Q5ST30 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VARS2Q5ST30 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms