Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 AC140658.5-201ENST00000438532 169 ntBASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 AC074386.1-202ENST00000463561 864 ntBASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 PDPK2P-202ENST00000562415 1191 ntBASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 AC005498.2-205ENST00000593218 784 ntBASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 AL009183.1-201ENST00000603760 355 ntBASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 AC020765.3-201ENST00000613051 740 ntBASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 Z92544.3-201ENST00000624747 417 ntBASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 AC092919.2-201ENST00000623631 1645 ntBASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HERC4Q5GLZ8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 AC015922.1-201ENST00000421102 1152 ntBASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 LINC01144-201ENST00000626198 1710 ntBASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC4Q5GLZ8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERC4Q5GLZ8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms