Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LINC01559Q495D7 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.47□□□□□ -0.41
LINC01559Q495D7 GGT3P-204ENST00000453783 1664 ntBASIC12.47□□□□□ -0.41
LINC01559Q495D7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC01559Q495D7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01559Q495D7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01559Q495D7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 MTCYBP11-201ENST00000447254 1109 ntBASIC12.46□□□□□ -0.41
LINC01559Q495D7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01559Q495D7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01559Q495D7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC01559Q495D7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
LINC01559Q495D7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01559Q495D7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
LINC01559Q495D7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC01559Q495D7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01559Q495D7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01559Q495D7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01559Q495D7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01559Q495D7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LINC01559Q495D7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01559Q495D7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
LINC01559Q495D7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC01559Q495D7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01559Q495D7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01559Q495D7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01559Q495D7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01559Q495D7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01559Q495D7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01559Q495D7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01559Q495D7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01559Q495D7 FAM45BP-202ENST00000592932 1624 ntBASIC12.45□□□□□ -0.42
LINC01559Q495D7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01559Q495D7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01559Q495D7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01559Q495D7 MGST3-204ENST00000367888 778 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC01559Q495D7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01559Q495D7 AK4P3-201ENST00000418260 669 ntBASIC12.45□□□□□ -0.42
LINC01559Q495D7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms