Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSBP1Q04837 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 TSPY5P-201ENST00000426936 936 ntBASIC13.94□□□□□ -0.18
SSBP1Q04837 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 AC010203.1-204ENST00000548782 407 ntBASIC13.94□□□□□ -0.18
SSBP1Q04837 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.94□□□□□ -0.18
SSBP1Q04837 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 AC010331.1-201ENST00000611423 582 ntBASIC13.94□□□□□ -0.18
SSBP1Q04837 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.94□□□□□ -0.18
SSBP1Q04837 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.94□□□□□ -0.18
SSBP1Q04837 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSBP1Q04837 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SSBP1Q04837 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP1Q04837 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP1Q04837 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP1Q04837 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP1Q04837 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.93□□□□□ -0.18
SSBP1Q04837 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SSBP1Q04837 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 AC138035.3-201ENST00000622706 2791 ntBASIC13.93□□□□□ -0.18
SSBP1Q04837 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SSBP1Q04837 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP1Q04837 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SSBP1Q04837 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP1Q04837 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.93□□□□□ -0.18
SSBP1Q04837 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.93□□□□□ -0.18
SSBP1Q04837 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP1Q04837 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.93□□□□□ -0.18
SSBP1Q04837 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.93□□□□□ -0.18
SSBP1Q04837 CYP2A7P1-201ENST00000595391 815 ntBASIC13.93□□□□□ -0.18
SSBP1Q04837 AP001350.2-201ENST00000625104 1094 ntBASIC13.93□□□□□ -0.18
SSBP1Q04837 AP006294.2-201ENST00000641667 209 ntBASIC13.93□□□□□ -0.18
SSBP1Q04837 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSBP1Q04837 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms