Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.55■□□□□ 0.4
CDR2Q01850 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.55■□□□□ 0.4
CDR2Q01850 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDR2Q01850 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDR2Q01850 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.55■□□□□ 0.4
CDR2Q01850 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDR2Q01850 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 AL590627.1-203ENST00000421194 1026 ntBASIC17.55■□□□□ 0.4
CDR2Q01850 AC092474.2-201ENST00000424288 719 ntBASIC17.55■□□□□ 0.4
CDR2Q01850 AC007967.2-201ENST00000432613 625 ntBASIC17.55■□□□□ 0.4
CDR2Q01850 AC140658.5-201ENST00000438532 169 ntBASIC17.55■□□□□ 0.4
CDR2Q01850 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.55■□□□□ 0.4
CDR2Q01850 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.55■□□□□ 0.4
CDR2Q01850 KRT19P2-202ENST00000557173 1012 ntBASIC17.55■□□□□ 0.4
CDR2Q01850 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDR2Q01850 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.55■□□□□ 0.4
CDR2Q01850 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.55■□□□□ 0.4
CDR2Q01850 AL592424.1-201ENST00000563624 1536 ntBASIC17.55■□□□□ 0.4
CDR2Q01850 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.55■□□□□ 0.4
CDR2Q01850 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.55■□□□□ 0.4
CDR2Q01850 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.55■□□□□ 0.4
CDR2Q01850 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDR2Q01850 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.55■□□□□ 0.4
CDR2Q01850 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.55■□□□□ 0.4
CDR2Q01850 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDR2Q01850 AL365203.3-201ENST00000609742 2057 ntBASIC17.54■□□□□ 0.4
CDR2Q01850 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDR2Q01850 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.54■□□□□ 0.4
CDR2Q01850 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.54■□□□□ 0.4
CDR2Q01850 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDR2Q01850 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDR2Q01850 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.54■□□□□ 0.4
CDR2Q01850 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDR2Q01850 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CDR2Q01850 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CDR2Q01850 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.54■□□□□ 0.4
CDR2Q01850 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDR2Q01850 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.54■□□□□ 0.4
CDR2Q01850 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.54■□□□□ 0.4
CDR2Q01850 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDR2Q01850 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.54■□□□□ 0.4
CDR2Q01850 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
CDR2Q01850 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDR2Q01850 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDR2Q01850 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CDR2Q01850 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDR2Q01850 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
CDR2Q01850 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDR2Q01850 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.53■□□□□ 0.4
CDR2Q01850 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDR2Q01850 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CDR2Q01850 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDR2Q01850 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.53■□□□□ 0.4
CDR2Q01850 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.53■□□□□ 0.4
CDR2Q01850 AL603832.2-201ENST00000566195 2125 ntBASIC17.53■□□□□ 0.4
CDR2Q01850 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 AC024909.3-201ENST00000611513 2257 ntBASIC17.53■□□□□ 0.4
CDR2Q01850 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDR2Q01850 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.53■□□□□ 0.4
CDR2Q01850 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.53■□□□□ 0.4
CDR2Q01850 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
CDR2Q01850 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.53■□□□□ 0.4
CDR2Q01850 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.53■□□□□ 0.4
CDR2Q01850 BX640515.1-201ENST00000617215 977 ntBASIC17.53■□□□□ 0.4
CDR2Q01850 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.53■□□□□ 0.4
CDR2Q01850 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDR2Q01850 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.53■□□□□ 0.4
CDR2Q01850 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.53■□□□□ 0.4
CDR2Q01850 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms