Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
UBA52P62987 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
UBA52P62987 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.28□□□□□ -0.12
UBA52P62987 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 RPSAP43-201ENST00000402237 625 ntBASIC14.28□□□□□ -0.12
UBA52P62987 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.28□□□□□ -0.12
UBA52P62987 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.28□□□□□ -0.12
UBA52P62987 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.28□□□□□ -0.12
UBA52P62987 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.28□□□□□ -0.12
UBA52P62987 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.28□□□□□ -0.12
UBA52P62987 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.28□□□□□ -0.12
UBA52P62987 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.28□□□□□ -0.12
UBA52P62987 AC112698.1-201ENST00000510299 916 ntBASIC14.28□□□□□ -0.12
UBA52P62987 RNA5SP416-201ENST00000516838 111 ntBASIC14.28□□□□□ -0.12
UBA52P62987 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.28□□□□□ -0.12
UBA52P62987 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.28□□□□□ -0.12
UBA52P62987 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.28□□□□□ -0.12
UBA52P62987 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.28□□□□□ -0.12
UBA52P62987 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.28□□□□□ -0.12
UBA52P62987 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
UBA52P62987 MTHFR-217ENST00000641820 1569 ntBASIC14.28□□□□□ -0.12
UBA52P62987 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 MIR600HG-201ENST00000449175 5984 ntBASIC14.28□□□□□ -0.12
UBA52P62987 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
UBA52P62987 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.28□□□□□ -0.12
UBA52P62987 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBA52P62987 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
UBA52P62987 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.28□□□□□ -0.12
UBA52P62987 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.27□□□□□ -0.12
UBA52P62987 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.27□□□□□ -0.12
UBA52P62987 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
UBA52P62987 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
UBA52P62987 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.27□□□□□ -0.12
UBA52P62987 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UBA52P62987 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.27□□□□□ -0.12
UBA52P62987 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBA52P62987 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 YBX2P1-201ENST00000394192 760 ntBASIC14.27□□□□□ -0.13
UBA52P62987 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.27□□□□□ -0.13
UBA52P62987 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.27□□□□□ -0.13
UBA52P62987 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.27□□□□□ -0.13
UBA52P62987 UNC93B6-202ENST00000528242 690 ntBASIC14.27□□□□□ -0.13
UBA52P62987 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
UBA52P62987 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.27□□□□□ -0.13
UBA52P62987 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.27□□□□□ -0.13
UBA52P62987 AC079781.4-201ENST00000641908 219 ntBASIC14.27□□□□□ -0.13
UBA52P62987 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.27□□□□□ -0.13
UBA52P62987 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.27□□□□□ -0.13
UBA52P62987 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.27□□□□□ -0.13
UBA52P62987 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.27□□□□□ -0.13
UBA52P62987 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBA52P62987 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBA52P62987 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBA52P62987 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBA52P62987 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBA52P62987 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBA52P62987 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.26□□□□□ -0.13
UBA52P62987 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.26□□□□□ -0.13
UBA52P62987 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBA52P62987 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBA52P62987 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms