Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 AC125807.1-201ENST00000483097 614 ntBASIC18.82■□□□□ 0.6
CHMP4BP1P59074 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP4BP1P59074 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.81■□□□□ 0.6
CHMP4BP1P59074 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 RNA5SP421-201ENST00000516864 134 ntBASIC18.81■□□□□ 0.6
CHMP4BP1P59074 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.81■□□□□ 0.6
CHMP4BP1P59074 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 AC005915.1-201ENST00000624912 2018 ntBASIC18.81■□□□□ 0.6
CHMP4BP1P59074 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP4BP1P59074 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 AL596257.1-201ENST00000641463 2694 ntBASIC18.8■□□□□ 0.6
CHMP4BP1P59074 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 AL353732.1-201ENST00000569618 1459 ntBASIC18.8■□□□□ 0.6
CHMP4BP1P59074 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 PMS2P4-201ENST00000412466 1052 ntBASIC18.8■□□□□ 0.6
CHMP4BP1P59074 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 KLF2P3-201ENST00000451977 1087 ntBASIC18.8■□□□□ 0.6
CHMP4BP1P59074 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms