Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.76■□□□□ 0.11
VSX2P58304 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.76■□□□□ 0.11
VSX2P58304 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.76■□□□□ 0.11
VSX2P58304 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.76■□□□□ 0.11
VSX2P58304 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
VSX2P58304 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.76■□□□□ 0.11
VSX2P58304 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.76■□□□□ 0.11
VSX2P58304 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX2P58304 AC079328.2-201ENST00000561241 3354 ntBASIC15.76■□□□□ 0.11
VSX2P58304 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
VSX2P58304 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX2P58304 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.76■□□□□ 0.11
VSX2P58304 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VSX2P58304 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VSX2P58304 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.75■□□□□ 0.11
VSX2P58304 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.75■□□□□ 0.11
VSX2P58304 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.75■□□□□ 0.11
VSX2P58304 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
VSX2P58304 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VSX2P58304 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.75■□□□□ 0.11
VSX2P58304 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.75■□□□□ 0.11
VSX2P58304 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.75■□□□□ 0.11
VSX2P58304 PRYP6-201ENST00000514804 343 ntBASIC15.75■□□□□ 0.11
VSX2P58304 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.75■□□□□ 0.11
VSX2P58304 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 SLC25A39P2-201ENST00000537614 270 ntBASIC15.75■□□□□ 0.11
VSX2P58304 AC004449.1-201ENST00000564240 433 ntBASIC15.75■□□□□ 0.11
VSX2P58304 AP000842.3-202ENST00000569238 1080 ntBASIC15.75■□□□□ 0.11
VSX2P58304 AC009093.7-201ENST00000623853 1223 ntBASIC15.75■□□□□ 0.11
VSX2P58304 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.75■□□□□ 0.11
VSX2P58304 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
VSX2P58304 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.75■□□□□ 0.11
VSX2P58304 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX2P58304 AC073439.1-201ENST00000624121 1774 ntBASIC15.75■□□□□ 0.11
VSX2P58304 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VSX2P58304 AGGF1P2-201ENST00000426656 2106 ntBASIC15.74■□□□□ 0.11
VSX2P58304 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.74■□□□□ 0.11
VSX2P58304 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.74■□□□□ 0.11
VSX2P58304 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.74■□□□□ 0.11
VSX2P58304 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.74■□□□□ 0.11
VSX2P58304 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.74■□□□□ 0.11
VSX2P58304 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 PCDH8P1-201ENST00000428983 2773 ntBASIC15.74■□□□□ 0.11
VSX2P58304 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VSX2P58304 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 AL139400.1-201ENST00000366220 510 ntBASIC15.74■□□□□ 0.11
VSX2P58304 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.74■□□□□ 0.11
VSX2P58304 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.74■□□□□ 0.11
VSX2P58304 PMS2P2-201ENST00000425039 1128 ntBASIC15.74■□□□□ 0.11
VSX2P58304 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.74■□□□□ 0.11
VSX2P58304 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.74■□□□□ 0.11
VSX2P58304 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.74■□□□□ 0.11
VSX2P58304 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.74■□□□□ 0.11
VSX2P58304 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.74■□□□□ 0.11
VSX2P58304 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.74■□□□□ 0.11
VSX2P58304 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.74■□□□□ 0.11
VSX2P58304 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.74■□□□□ 0.11
VSX2P58304 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.74■□□□□ 0.11
VSX2P58304 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.74■□□□□ 0.11
VSX2P58304 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.74■□□□□ 0.11
VSX2P58304 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
VSX2P58304 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VSX2P58304 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms