Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 SIGLEC16-201ENST00000599858 1437 ntBASIC14.36□□□□□ -0.11
CLDN12P56749 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN12P56749 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN12P56749 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN12P56749 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN12P56749 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN12P56749 AL136038.3-201ENST00000561909 1096 ntBASIC14.36□□□□□ -0.11
CLDN12P56749 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN12P56749 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN12P56749 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLDN12P56749 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN12P56749 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN12P56749 KRT18P1-202ENST00000452408 1331 ntBASIC14.36□□□□□ -0.11
CLDN12P56749 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN12P56749 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLDN12P56749 NSUN5P1-202ENST00000421140 1535 ntBASIC14.36□□□□□ -0.11
CLDN12P56749 NSUN5P2-203ENST00000457352 1529 ntBASIC14.36□□□□□ -0.11
CLDN12P56749 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN12P56749 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN12P56749 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 AC016734.2-201ENST00000624325 1377 ntBASIC14.35□□□□□ -0.11
CLDN12P56749 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLDN12P56749 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN12P56749 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CLDN12P56749 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLDN12P56749 Z69720.1-201ENST00000601483 472 ntBASIC14.35□□□□□ -0.11
CLDN12P56749 AL353135.1-201ENST00000606729 504 ntBASIC14.35□□□□□ -0.11
CLDN12P56749 AL121672.3-201ENST00000608644 468 ntBASIC14.35□□□□□ -0.11
CLDN12P56749 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.35□□□□□ -0.11
CLDN12P56749 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN12P56749 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN12P56749 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN12P56749 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN12P56749 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 GPAA1P2-202ENST00000606848 1787 ntBASIC14.34□□□□□ -0.11
CLDN12P56749 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN12P56749 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDN12P56749 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLDN12P56749 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN12P56749 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN12P56749 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN12P56749 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN12P56749 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN12P56749 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms