Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH4P55283 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 TUBB3P1-201ENST00000405796 1332 ntBASIC16.75■□□□□ 0.27
CDH4P55283 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH4P55283 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH4P55283 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH4P55283 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH4P55283 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.75■□□□□ 0.27
CDH4P55283 AC061975.2-201ENST00000581722 295 ntBASIC16.75■□□□□ 0.27
CDH4P55283 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH4P55283 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH4P55283 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDH4P55283 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH4P55283 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH4P55283 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH4P55283 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH4P55283 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDH4P55283 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 AL353705.2-201ENST00000428243 662 ntBASIC16.74■□□□□ 0.27
CDH4P55283 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.74■□□□□ 0.27
CDH4P55283 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.74■□□□□ 0.27
CDH4P55283 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH4P55283 AC027796.2-201ENST00000575326 344 ntBASIC16.74■□□□□ 0.27
CDH4P55283 MIR4453-201ENST00000584019 89 ntBASIC16.74■□□□□ 0.27
CDH4P55283 AC003101.2-201ENST00000612557 442 ntBASIC16.74■□□□□ 0.27
CDH4P55283 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH4P55283 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH4P55283 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CDH4P55283 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH4P55283 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH4P55283 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH4P55283 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDH4P55283 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH4P55283 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH4P55283 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 REXO1L8P-201ENST00000604378 1897 ntBASIC16.73■□□□□ 0.27
CDH4P55283 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH4P55283 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH4P55283 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms