Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC10.49□□□□□ -0.73
UBE2AP49459 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC10.49□□□□□ -0.73
UBE2AP49459 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC10.49□□□□□ -0.73
UBE2AP49459 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 LSM5-204ENST00000409909 740 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC10.49□□□□□ -0.73
UBE2AP49459 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 SAPCD2P3-201ENST00000455031 850 ntBASIC10.49□□□□□ -0.73
UBE2AP49459 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 RNF151-202ENST00000569210 853 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC10.49□□□□□ -0.73
UBE2AP49459 SDCCAG3P1-201ENST00000589292 1150 ntBASIC10.49□□□□□ -0.73
UBE2AP49459 MTDHP4-201ENST00000600287 670 ntBASIC10.49□□□□□ -0.73
UBE2AP49459 AC064862.7-201ENST00000604520 867 ntBASIC10.49□□□□□ -0.73
UBE2AP49459 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 AL355877.3-201ENST00000622820 899 ntBASIC10.49□□□□□ -0.73
UBE2AP49459 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
UBE2AP49459 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 AL391256.1-201ENST00000443260 1855 ntBASIC10.49□□□□□ -0.73
UBE2AP49459 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UBE2AP49459 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UBE2AP49459 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC10.49□□□□□ -0.73
UBE2AP49459 PCDHB17P-201ENST00000539533 2393 ntBASIC10.48□□□□□ -0.73
UBE2AP49459 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2AP49459 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC10.48□□□□□ -0.73
UBE2AP49459 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 HNRNPRP1-201ENST00000453465 1695 ntBASIC10.48□□□□□ -0.73
UBE2AP49459 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBE2AP49459 PI4KAP1-204ENST00000612579 1703 ntBASIC10.48□□□□□ -0.73
UBE2AP49459 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC10.48□□□□□ -0.73
UBE2AP49459 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2AP49459 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms