Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1DP48730 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1DP48730 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CSNK1DP48730 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.41■□□□□ 0.22
CSNK1DP48730 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1DP48730 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 KLF2P3-201ENST00000451977 1087 ntBASIC16.41■□□□□ 0.22
CSNK1DP48730 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CSNK1DP48730 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.41■□□□□ 0.22
CSNK1DP48730 RFPL4AP1-201ENST00000530883 850 ntBASIC16.41■□□□□ 0.22
CSNK1DP48730 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.41■□□□□ 0.22
CSNK1DP48730 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.41■□□□□ 0.22
CSNK1DP48730 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.41■□□□□ 0.22
CSNK1DP48730 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CSNK1DP48730 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CSNK1DP48730 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
CSNK1DP48730 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1DP48730 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1DP48730 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.41■□□□□ 0.22
CSNK1DP48730 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1DP48730 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CSNK1DP48730 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CSNK1DP48730 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CSNK1DP48730 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CSNK1DP48730 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.4■□□□□ 0.22
CSNK1DP48730 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.4■□□□□ 0.22
CSNK1DP48730 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.4■□□□□ 0.22
CSNK1DP48730 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.4■□□□□ 0.22
CSNK1DP48730 AC140878.1-201ENST00000565277 250 ntBASIC16.4■□□□□ 0.22
CSNK1DP48730 AC105021.1-202ENST00000570572 669 ntBASIC16.4■□□□□ 0.22
CSNK1DP48730 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.4■□□□□ 0.22
CSNK1DP48730 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1DP48730 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1DP48730 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1DP48730 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.4■□□□□ 0.22
CSNK1DP48730 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CSNK1DP48730 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1DP48730 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
CSNK1DP48730 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.39■□□□□ 0.21
CSNK1DP48730 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1DP48730 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1DP48730 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1DP48730 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1DP48730 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1DP48730 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.39■□□□□ 0.21
CSNK1DP48730 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.39■□□□□ 0.21
CSNK1DP48730 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.39■□□□□ 0.21
CSNK1DP48730 BANF1P1-201ENST00000553684 263 ntBASIC16.39■□□□□ 0.21
CSNK1DP48730 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1DP48730 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1DP48730 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms