Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.42■□□□□ 0.38
BRCC3P46736 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCC3P46736 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.42■□□□□ 0.38
BRCC3P46736 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.42■□□□□ 0.38
BRCC3P46736 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCC3P46736 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.42■□□□□ 0.38
BRCC3P46736 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCC3P46736 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.42■□□□□ 0.38
BRCC3P46736 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.42■□□□□ 0.38
BRCC3P46736 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.42■□□□□ 0.38
BRCC3P46736 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCC3P46736 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCC3P46736 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
BRCC3P46736 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRCC3P46736 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRCC3P46736 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BRCC3P46736 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.41■□□□□ 0.38
BRCC3P46736 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BRCC3P46736 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.41■□□□□ 0.38
BRCC3P46736 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BRCC3P46736 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.41■□□□□ 0.38
BRCC3P46736 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.41■□□□□ 0.38
BRCC3P46736 AC015922.1-201ENST00000421102 1152 ntBASIC17.41■□□□□ 0.38
BRCC3P46736 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 AC009477.1-201ENST00000452936 217 ntBASIC17.41■□□□□ 0.38
BRCC3P46736 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.41■□□□□ 0.38
BRCC3P46736 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.41■□□□□ 0.38
BRCC3P46736 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.41■□□□□ 0.38
BRCC3P46736 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.41■□□□□ 0.38
BRCC3P46736 AC009407.1-201ENST00000568958 598 ntBASIC17.41■□□□□ 0.38
BRCC3P46736 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
BRCC3P46736 AC008738.7-201ENST00000609744 511 ntBASIC17.41■□□□□ 0.38
BRCC3P46736 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
BRCC3P46736 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BRCC3P46736 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 AC087499.5-201ENST00000452760 1342 ntBASIC17.41■□□□□ 0.38
BRCC3P46736 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.41■□□□□ 0.38
BRCC3P46736 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BRCC3P46736 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCC3P46736 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
BRCC3P46736 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BRCC3P46736 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
BRCC3P46736 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.4■□□□□ 0.38
BRCC3P46736 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 FLJ38576-201ENST00000623820 2459 ntBASIC17.4■□□□□ 0.38
BRCC3P46736 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BRCC3P46736 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BRCC3P46736 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.4■□□□□ 0.38
BRCC3P46736 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.4■□□□□ 0.38
BRCC3P46736 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.4■□□□□ 0.38
BRCC3P46736 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.4■□□□□ 0.38
BRCC3P46736 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.4■□□□□ 0.38
BRCC3P46736 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.4■□□□□ 0.38
BRCC3P46736 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
BRCC3P46736 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
BRCC3P46736 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.4■□□□□ 0.38
BRCC3P46736 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BRCC3P46736 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
BRCC3P46736 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BRCC3P46736 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCC3P46736 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BRCC3P46736 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.39■□□□□ 0.38
BRCC3P46736 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BRCC3P46736 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.39■□□□□ 0.37
BRCC3P46736 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCC3P46736 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.39■□□□□ 0.37
BRCC3P46736 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCC3P46736 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCC3P46736 AC005052.1-201ENST00000625181 2492 ntBASIC17.39■□□□□ 0.37
BRCC3P46736 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCC3P46736 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BRCC3P46736 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCC3P46736 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRCC3P46736 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCC3P46736 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.39■□□□□ 0.37
BRCC3P46736 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCC3P46736 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms