Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 KRT43P-201ENST00000434019 910 ntBASIC20.73■□□□□ 0.91
ATP6V1AP38606 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 RN7SL399P-201ENST00000471648 279 ntBASIC20.73■□□□□ 0.91
ATP6V1AP38606 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 AC138932.1-201ENST00000534164 6830 ntBASIC20.73■□□□□ 0.91
ATP6V1AP38606 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP6V1AP38606 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V1AP38606 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V1AP38606 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 AC233724.13-201ENST00000598383 410 ntBASIC20.72■□□□□ 0.91
ATP6V1AP38606 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V1AP38606 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms