Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.61□□□□□ -0.23
SNCAP37840 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.61□□□□□ -0.23
SNCAP37840 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.61□□□□□ -0.23
SNCAP37840 AD001527.2-201ENST00000622994 785 ntBASIC13.61□□□□□ -0.23
SNCAP37840 AL121956.5-201ENST00000625261 221 ntBASIC13.61□□□□□ -0.23
SNCAP37840 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.61□□□□□ -0.23
SNCAP37840 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.61□□□□□ -0.23
SNCAP37840 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.6□□□□□ -0.23
SNCAP37840 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 AL021920.2-201ENST00000624828 1351 ntBASIC13.6□□□□□ -0.23
SNCAP37840 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.6□□□□□ -0.23
SNCAP37840 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.6□□□□□ -0.23
SNCAP37840 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.6□□□□□ -0.23
SNCAP37840 AC010491.1-201ENST00000563101 2797 ntBASIC13.6□□□□□ -0.23
SNCAP37840 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.6□□□□□ -0.23
SNCAP37840 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
SNCAP37840 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
SNCAP37840 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.6□□□□□ -0.23
SNCAP37840 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SNCAP37840 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.6□□□□□ -0.23
SNCAP37840 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCAP37840 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SNCAP37840 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SNCAP37840 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.59□□□□□ -0.23
SNCAP37840 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 SBF1P1-201ENST00000444527 5631 ntBASIC13.59□□□□□ -0.23
SNCAP37840 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNCAP37840 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SNCAP37840 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.59□□□□□ -0.23
SNCAP37840 AL020989.1-201ENST00000422979 469 ntBASIC13.59□□□□□ -0.23
SNCAP37840 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.59□□□□□ -0.23
SNCAP37840 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.59□□□□□ -0.23
SNCAP37840 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.59□□□□□ -0.23
SNCAP37840 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.59□□□□□ -0.23
SNCAP37840 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SNCAP37840 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.59□□□□□ -0.23
SNCAP37840 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNCAP37840 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCAP37840 AL596087.1-201ENST00000400979 1969 ntBASIC13.59□□□□□ -0.23
SNCAP37840 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.59□□□□□ -0.23
SNCAP37840 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms