Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHKAP35790 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.37■□□□□ 0.37
CHKAP35790 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHKAP35790 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.37■□□□□ 0.37
CHKAP35790 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.37■□□□□ 0.37
CHKAP35790 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.37■□□□□ 0.37
CHKAP35790 AC109635.5-201ENST00000533593 962 ntBASIC17.37■□□□□ 0.37
CHKAP35790 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHKAP35790 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.37■□□□□ 0.37
CHKAP35790 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHKAP35790 AL009183.1-201ENST00000603760 355 ntBASIC17.37■□□□□ 0.37
CHKAP35790 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 KRT18P28-201ENST00000453838 1332 ntBASIC17.37■□□□□ 0.37
CHKAP35790 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHKAP35790 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.37■□□□□ 0.37
CHKAP35790 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.37■□□□□ 0.37
CHKAP35790 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.37■□□□□ 0.37
CHKAP35790 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CHKAP35790 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.37■□□□□ 0.37
CHKAP35790 ME2P1-201ENST00000426028 1970 ntBASIC17.37■□□□□ 0.37
CHKAP35790 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHKAP35790 CROCCP1-201ENST00000426910 5675 ntBASIC17.36■□□□□ 0.37
CHKAP35790 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.36■□□□□ 0.37
CHKAP35790 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.36■□□□□ 0.37
CHKAP35790 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 SLC22A20-204ENST00000530038 1673 ntBASIC17.36■□□□□ 0.37
CHKAP35790 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 AL355306.1-201ENST00000415580 579 ntBASIC17.36■□□□□ 0.37
CHKAP35790 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.36■□□□□ 0.37
CHKAP35790 RN7SL589P-201ENST00000481268 310 ntBASIC17.36■□□□□ 0.37
CHKAP35790 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.36■□□□□ 0.37
CHKAP35790 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.36■□□□□ 0.37
CHKAP35790 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.36■□□□□ 0.37
CHKAP35790 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHKAP35790 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.36■□□□□ 0.37
CHKAP35790 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 AC099522.2-201ENST00000607001 744 ntBASIC17.36■□□□□ 0.37
CHKAP35790 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 AC026120.1-201ENST00000611536 926 ntBASIC17.36■□□□□ 0.37
CHKAP35790 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CHKAP35790 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.36■□□□□ 0.37
CHKAP35790 AL596257.1-201ENST00000641463 2694 ntBASIC17.36■□□□□ 0.37
CHKAP35790 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHKAP35790 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 AL365203.3-201ENST00000609742 2057 ntBASIC17.36■□□□□ 0.37
CHKAP35790 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.36■□□□□ 0.37
CHKAP35790 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.36■□□□□ 0.37
CHKAP35790 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CHKAP35790 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHKAP35790 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHKAP35790 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHKAP35790 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.35■□□□□ 0.37
CHKAP35790 HYMAI-201ENST00000635591 3347 ntBASIC17.35■□□□□ 0.37
CHKAP35790 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.35■□□□□ 0.37
CHKAP35790 AC105917.1-201ENST00000506637 2539 ntBASIC17.35■□□□□ 0.37
CHKAP35790 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.35■□□□□ 0.37
CHKAP35790 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHKAP35790 PMS2P4-201ENST00000412466 1052 ntBASIC17.35■□□□□ 0.37
CHKAP35790 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms