Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 KLF4P1-201ENST00000412782 1185 ntBASIC16.18■□□□□ 0.18
SOX11P35716 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 AC136632.2-201ENST00000512891 861 ntBASIC16.18■□□□□ 0.18
SOX11P35716 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.18■□□□□ 0.18
SOX11P35716 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX11P35716 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX11P35716 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX11P35716 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.18■□□□□ 0.18
SOX11P35716 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
SOX11P35716 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX11P35716 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX11P35716 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SOX11P35716 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SOX11P35716 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SOX11P35716 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX11P35716 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 AC148477.5-201ENST00000625164 1645 ntBASIC16.17■□□□□ 0.18
SOX11P35716 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX11P35716 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX11P35716 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.17■□□□□ 0.18
SOX11P35716 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.17■□□□□ 0.18
SOX11P35716 KRT18P3-201ENST00000451602 1288 ntBASIC16.17■□□□□ 0.18
SOX11P35716 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
SOX11P35716 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.17■□□□□ 0.18
SOX11P35716 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
SOX11P35716 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.17■□□□□ 0.18
SOX11P35716 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX11P35716 AC004706.3-202ENST00000621574 984 ntBASIC16.17■□□□□ 0.18
SOX11P35716 AC005593.1-201ENST00000624894 515 ntBASIC16.17■□□□□ 0.18
SOX11P35716 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX11P35716 AL513523.2-202ENST00000427283 2040 ntBASIC16.17■□□□□ 0.18
SOX11P35716 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SOX11P35716 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SOX11P35716 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX11P35716 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SOX11P35716 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SOX11P35716 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SOX11P35716 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SOX11P35716 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SOX11P35716 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.16■□□□□ 0.18
SOX11P35716 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SOX11P35716 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SOX11P35716 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SOX11P35716 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX11P35716 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX11P35716 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.16■□□□□ 0.18
SOX11P35716 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.16■□□□□ 0.18
SOX11P35716 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.16■□□□□ 0.18
SOX11P35716 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.16■□□□□ 0.18
SOX11P35716 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.16■□□□□ 0.18
SOX11P35716 STK25P1-201ENST00000585406 838 ntBASIC16.16■□□□□ 0.18
SOX11P35716 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.16■□□□□ 0.18
SOX11P35716 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SOX11P35716 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SOX11P35716 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.16■□□□□ 0.18
SOX11P35716 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms