Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.69■□□□□ 0.1
GPC1P35052 AC017007.3-201ENST00000479865 435 ntBASIC15.69■□□□□ 0.1
GPC1P35052 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.69■□□□□ 0.1
GPC1P35052 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC1P35052 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC1P35052 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
GPC1P35052 AC104692.2-201ENST00000603054 253 ntBASIC15.69■□□□□ 0.1
GPC1P35052 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC1P35052 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.69■□□□□ 0.1
GPC1P35052 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GPC1P35052 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC1P35052 CYP2T1P-202ENST00000641596 2535 ntBASIC15.69■□□□□ 0.1
GPC1P35052 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC1P35052 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GPC1P35052 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
GPC1P35052 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.69■□□□□ 0.1
GPC1P35052 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC1P35052 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC1P35052 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC1P35052 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC1P35052 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC1P35052 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC1P35052 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC1P35052 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 MRPL3P1-201ENST00000400109 1033 ntBASIC15.68■□□□□ 0.1
GPC1P35052 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GPC1P35052 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC1P35052 AL662844.1-201ENST00000546340 181 ntBASIC15.68■□□□□ 0.1
GPC1P35052 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC1P35052 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC1P35052 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC1P35052 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 AC116407.3-201ENST00000623905 1129 ntBASIC15.68■□□□□ 0.1
GPC1P35052 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC1P35052 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC1P35052 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC1P35052 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.68■□□□□ 0.1
GPC1P35052 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC1P35052 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC1P35052 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GPC1P35052 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
GPC1P35052 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC1P35052 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GPC1P35052 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.67■□□□□ 0.1
GPC1P35052 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GPC1P35052 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GPC1P35052 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
GPC1P35052 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GPC1P35052 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.67■□□□□ 0.1
GPC1P35052 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GPC1P35052 CXCL1P1-201ENST00000502804 216 ntBASIC15.67■□□□□ 0.1
GPC1P35052 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms