Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL4A5P29400 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 BAATP1-201ENST00000412284 1225 ntBASIC19.35■□□□□ 0.69
COL4A5P29400 AC134915.1-201ENST00000426461 574 ntBASIC19.35■□□□□ 0.69
COL4A5P29400 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.35■□□□□ 0.69
COL4A5P29400 IGHJ2P-201ENST00000454480 60 ntBASIC19.35■□□□□ 0.69
COL4A5P29400 PFN1P12-201ENST00000455938 534 ntBASIC19.35■□□□□ 0.69
COL4A5P29400 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A5P29400 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.35■□□□□ 0.69
COL4A5P29400 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.35■□□□□ 0.69
COL4A5P29400 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A5P29400 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL4A5P29400 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.35■□□□□ 0.69
COL4A5P29400 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A5P29400 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
COL4A5P29400 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.35■□□□□ 0.69
COL4A5P29400 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A5P29400 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
COL4A5P29400 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A5P29400 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A5P29400 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 LETM1P2-201ENST00000597330 2178 ntBASIC19.34■□□□□ 0.69
COL4A5P29400 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL4A5P29400 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A5P29400 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.34■□□□□ 0.69
COL4A5P29400 RHOXF1P1-202ENST00000635473 501 ntBASIC19.34■□□□□ 0.69
COL4A5P29400 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A5P29400 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL4A5P29400 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A5P29400 PKD1P6-201ENST00000343738 4769 ntBASIC19.34■□□□□ 0.69
COL4A5P29400 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A5P29400 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A5P29400 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A5P29400 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A5P29400 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
COL4A5P29400 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.33■□□□□ 0.69
COL4A5P29400 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A5P29400 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A5P29400 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A5P29400 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.33■□□□□ 0.69
COL4A5P29400 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A5P29400 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A5P29400 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.33■□□□□ 0.69
COL4A5P29400 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.33■□□□□ 0.69
COL4A5P29400 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.33■□□□□ 0.69
COL4A5P29400 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A5P29400 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
COL4A5P29400 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
COL4A5P29400 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.33■□□□□ 0.69
COL4A5P29400 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.33■□□□□ 0.69
COL4A5P29400 REXO1L8P-201ENST00000604378 1897 ntBASIC19.33■□□□□ 0.69
COL4A5P29400 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
COL4A5P29400 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A5P29400 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.33■□□□□ 0.68
COL4A5P29400 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A5P29400 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
COL4A5P29400 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A5P29400 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A5P29400 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A5P29400 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
COL4A5P29400 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
COL4A5P29400 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.33■□□□□ 0.68
COL4A5P29400 MIR326-201ENST00000362220 95 ntBASIC19.33■□□□□ 0.68
COL4A5P29400 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A5P29400 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
COL4A5P29400 C1QBPP1-201ENST00000400117 770 ntBASIC19.33■□□□□ 0.68
COL4A5P29400 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.33■□□□□ 0.68
COL4A5P29400 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.33■□□□□ 0.68
COL4A5P29400 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.33■□□□□ 0.68
COL4A5P29400 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.33■□□□□ 0.68
COL4A5P29400 AL118558.3-201ENST00000607414 1079 ntBASIC19.33■□□□□ 0.68
COL4A5P29400 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.33■□□□□ 0.68
COL4A5P29400 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A5P29400 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
COL4A5P29400 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A5P29400 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A5P29400 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A5P29400 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A5P29400 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A5P29400 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
COL4A5P29400 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A5P29400 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A5P29400 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms