Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.77■□□□□ 0.27
PTPN3P26045 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.77■□□□□ 0.27
PTPN3P26045 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN3P26045 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN3P26045 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN3P26045 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN3P26045 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN3P26045 MIR574-201ENST00000385209 96 ntBASIC16.76■□□□□ 0.27
PTPN3P26045 AC002056.1-201ENST00000395613 760 ntBASIC16.76■□□□□ 0.27
PTPN3P26045 MIR940-201ENST00000401276 94 ntBASIC16.76■□□□□ 0.27
PTPN3P26045 AC023274.1-201ENST00000418278 595 ntBASIC16.76■□□□□ 0.27
PTPN3P26045 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN3P26045 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN3P26045 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN3P26045 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN3P26045 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PTPN3P26045 AL161645.1-201ENST00000622716 1255 ntBASIC16.76■□□□□ 0.27
PTPN3P26045 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PTPN3P26045 WASH6P-202ENST00000359512 1437 ntBASIC16.76■□□□□ 0.27
PTPN3P26045 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN3P26045 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN3P26045 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN3P26045 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTPN3P26045 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PTPN3P26045 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTPN3P26045 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN3P26045 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN3P26045 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PTPN3P26045 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN3P26045 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.75■□□□□ 0.27
PTPN3P26045 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PTPN3P26045 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PTPN3P26045 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN3P26045 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN3P26045 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PTPN3P26045 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.75■□□□□ 0.27
PTPN3P26045 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN3P26045 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN3P26045 U82695.1-201ENST00000635752 1889 ntBASIC16.75■□□□□ 0.27
PTPN3P26045 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTPN3P26045 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
PTPN3P26045 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN3P26045 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PTPN3P26045 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN3P26045 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN3P26045 AC073439.1-201ENST00000624121 1774 ntBASIC16.74■□□□□ 0.27
PTPN3P26045 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN3P26045 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN3P26045 AC024909.3-201ENST00000611513 2257 ntBASIC16.74■□□□□ 0.27
PTPN3P26045 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.74■□□□□ 0.27
PTPN3P26045 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PTPN3P26045 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN3P26045 PGAM5P1-201ENST00000518923 814 ntBASIC16.74■□□□□ 0.27
PTPN3P26045 AC112191.1-201ENST00000523689 701 ntBASIC16.74■□□□□ 0.27
PTPN3P26045 KRT18P58-201ENST00000527480 1120 ntBASIC16.74■□□□□ 0.27
PTPN3P26045 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PTPN3P26045 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PTPN3P26045 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN3P26045 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN3P26045 AC008741.2-201ENST00000612792 3115 ntBASIC16.74■□□□□ 0.27
PTPN3P26045 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms