Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL2P13500 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL2P13500 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL2P13500 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL2P13500 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL2P13500 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL2P13500 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL2P13500 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL2P13500 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CCL2P13500 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCL2P13500 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL2P13500 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CCL2P13500 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCL2P13500 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL2P13500 LINC02199-201ENST00000506655 2702 ntBASIC14.35□□□□□ -0.11
CCL2P13500 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL2P13500 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
CCL2P13500 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL2P13500 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL2P13500 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL2P13500 WASH6P-202ENST00000359512 1437 ntBASIC14.35□□□□□ -0.11
CCL2P13500 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 ME2P1-201ENST00000426028 1970 ntBASIC14.35□□□□□ -0.11
CCL2P13500 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CCL2P13500 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCL2P13500 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 AL355306.1-201ENST00000415580 579 ntBASIC14.35□□□□□ -0.11
CCL2P13500 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL2P13500 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL2P13500 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL2P13500 RARRES2P8-201ENST00000566335 367 ntBASIC14.35□□□□□ -0.11
CCL2P13500 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.35□□□□□ -0.11
CCL2P13500 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCL2P13500 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CCL2P13500 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL2P13500 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCL2P13500 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL2P13500 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL2P13500 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCL2P13500 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCL2P13500 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL2P13500 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL2P13500 ELL2P1-201ENST00000413990 1906 ntBASIC14.35□□□□□ -0.11
CCL2P13500 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCL2P13500 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL2P13500 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 NFIC-211ENST00000641145 8399 ntBASIC14.34□□□□□ -0.11
CCL2P13500 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 TFAMP1-201ENST00000412727 736 ntBASIC14.34□□□□□ -0.11
CCL2P13500 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL2P13500 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL2P13500 TIMM8BP1-201ENST00000452384 211 ntBASIC14.34□□□□□ -0.11
CCL2P13500 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 KRT18P34-201ENST00000488218 1270 ntBASIC14.34□□□□□ -0.11
CCL2P13500 AL135744.1-201ENST00000565098 629 ntBASIC14.34□□□□□ -0.11
CCL2P13500 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.34□□□□□ -0.11
CCL2P13500 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 AC055717.3-201ENST00000622967 595 ntBASIC14.34□□□□□ -0.11
CCL2P13500 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL2P13500 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL2P13500 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
CCL2P13500 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL2P13500 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL2P13500 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms