Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 AC104109.2-201ENST00000602919 1418 ntBASIC17.29■□□□□ 0.36
RARAP10276 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RARAP10276 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RARAP10276 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 RNU1-129P-201ENST00000384064 167 ntBASIC17.28■□□□□ 0.36
RARAP10276 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.28■□□□□ 0.36
RARAP10276 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.28■□□□□ 0.36
RARAP10276 U1.21-201ENST00000580816 167 ntBASIC17.28■□□□□ 0.36
RARAP10276 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.28■□□□□ 0.36
RARAP10276 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RARAP10276 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.28■□□□□ 0.36
RARAP10276 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.28■□□□□ 0.36
RARAP10276 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RARAP10276 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RARAP10276 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RARAP10276 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RARAP10276 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.28■□□□□ 0.36
RARAP10276 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARAP10276 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARAP10276 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARAP10276 IL9RP2-201ENST00000423948 1312 ntBASIC17.27■□□□□ 0.36
RARAP10276 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
RARAP10276 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RARAP10276 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RARAP10276 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RARAP10276 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RARAP10276 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 RPL13AP23-201ENST00000480739 586 ntBASIC17.27■□□□□ 0.36
RARAP10276 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.27■□□□□ 0.36
RARAP10276 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.27■□□□□ 0.36
RARAP10276 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARAP10276 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.27■□□□□ 0.36
RARAP10276 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.27■□□□□ 0.36
RARAP10276 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.27■□□□□ 0.36
RARAP10276 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RARAP10276 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.27■□□□□ 0.36
RARAP10276 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RARAP10276 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RARAP10276 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RARAP10276 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.27■□□□□ 0.35
RARAP10276 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.27■□□□□ 0.35
RARAP10276 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.27■□□□□ 0.35
RARAP10276 AL136379.1-201ENST00000623471 2642 ntBASIC17.27■□□□□ 0.35
RARAP10276 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RARAP10276 LINC01144-201ENST00000626198 1710 ntBASIC17.27■□□□□ 0.35
RARAP10276 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RARAP10276 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RARAP10276 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.27■□□□□ 0.35
RARAP10276 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RARAP10276 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RARAP10276 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.26■□□□□ 0.35
RARAP10276 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.26■□□□□ 0.35
RARAP10276 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.26■□□□□ 0.35
RARAP10276 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms