Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.66□□□□□ -0.06
ERCC1P07992 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ERCC1P07992 LINC00554-201ENST00000564841 3011 ntBASIC14.66□□□□□ -0.06
ERCC1P07992 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.65□□□□□ -0.06
ERCC1P07992 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
ERCC1P07992 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 AC132872.4-202ENST00000622924 2756 ntBASIC14.65□□□□□ -0.06
ERCC1P07992 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
ERCC1P07992 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.65□□□□□ -0.06
ERCC1P07992 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.65□□□□□ -0.06
ERCC1P07992 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
ERCC1P07992 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC1P07992 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ERCC1P07992 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
ERCC1P07992 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.64□□□□□ -0.07
ERCC1P07992 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ERCC1P07992 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ERCC1P07992 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.64□□□□□ -0.07
ERCC1P07992 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
ERCC1P07992 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.64□□□□□ -0.07
ERCC1P07992 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.64□□□□□ -0.07
ERCC1P07992 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.64□□□□□ -0.07
ERCC1P07992 PTCHD3P3-201ENST00000403073 906 ntBASIC14.64□□□□□ -0.07
ERCC1P07992 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.64□□□□□ -0.07
ERCC1P07992 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.64□□□□□ -0.07
ERCC1P07992 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.64□□□□□ -0.07
ERCC1P07992 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
ERCC1P07992 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.64□□□□□ -0.07
ERCC1P07992 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.64□□□□□ -0.07
ERCC1P07992 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.64□□□□□ -0.07
ERCC1P07992 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.64□□□□□ -0.07
ERCC1P07992 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
ERCC1P07992 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.64□□□□□ -0.07
ERCC1P07992 AL139011.1-202ENST00000642063 584 ntBASIC14.64□□□□□ -0.07
ERCC1P07992 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.64□□□□□ -0.07
ERCC1P07992 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 AL662844.4-201ENST00000606367 2838 ntBASIC14.64□□□□□ -0.07
ERCC1P07992 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ERCC1P07992 MTHFR-217ENST00000641820 1569 ntBASIC14.64□□□□□ -0.07
ERCC1P07992 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.64□□□□□ -0.07
ERCC1P07992 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC1P07992 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC1P07992 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC1P07992 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
ERCC1P07992 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms