Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.91□□□□□ -0.02
PPP1R3DO95685 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PPP1R3DO95685 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PPP1R3DO95685 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PPP1R3DO95685 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.91□□□□□ -0.02
PPP1R3DO95685 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PPP1R3DO95685 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP1R3DO95685 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PPP1R3DO95685 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP1R3DO95685 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.91□□□□□ -0.02
PPP1R3DO95685 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.91□□□□□ -0.02
PPP1R3DO95685 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP1R3DO95685 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PPP1R3DO95685 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP1R3DO95685 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.91□□□□□ -0.02
PPP1R3DO95685 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP1R3DO95685 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PPP1R3DO95685 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.91□□□□□ -0.02
PPP1R3DO95685 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 CLEC4GP1-201ENST00000596555 870 ntBASIC14.9□□□□□ -0.02
PPP1R3DO95685 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 AC020765.3-201ENST00000613051 740 ntBASIC14.9□□□□□ -0.02
PPP1R3DO95685 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 LINC00554-201ENST00000564841 3011 ntBASIC14.9□□□□□ -0.02
PPP1R3DO95685 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PPP1R3DO95685 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PPP1R3DO95685 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PPP1R3DO95685 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.89□□□□□ -0.03
PPP1R3DO95685 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms