Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC021097.1-201ENST00000607902 574 ntBASIC16.57■□□□□ 0.24
VAPBO95292 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 AC010507.1-201ENST00000633895 436 ntBASIC16.57■□□□□ 0.24
VAPBO95292 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
VAPBO95292 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.57■□□□□ 0.24
VAPBO95292 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.57■□□□□ 0.24
VAPBO95292 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VAPBO95292 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VAPBO95292 LINC00554-201ENST00000564841 3011 ntBASIC16.56■□□□□ 0.24
VAPBO95292 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VAPBO95292 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.56■□□□□ 0.24
VAPBO95292 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
VAPBO95292 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
VAPBO95292 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.56■□□□□ 0.24
VAPBO95292 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 AC079776.4-201ENST00000511039 504 ntBASIC16.56■□□□□ 0.24
VAPBO95292 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 AC096734.2-201ENST00000562054 433 ntBASIC16.56■□□□□ 0.24
VAPBO95292 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.56■□□□□ 0.24
VAPBO95292 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
VAPBO95292 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.56■□□□□ 0.24
VAPBO95292 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.56■□□□□ 0.24
VAPBO95292 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VAPBO95292 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.55■□□□□ 0.24
VAPBO95292 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
VAPBO95292 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.55■□□□□ 0.24
VAPBO95292 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
VAPBO95292 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.55■□□□□ 0.24
VAPBO95292 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.55■□□□□ 0.24
VAPBO95292 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 PMS2P4-201ENST00000412466 1052 ntBASIC16.55■□□□□ 0.24
VAPBO95292 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.55■□□□□ 0.24
VAPBO95292 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.55■□□□□ 0.24
VAPBO95292 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.55■□□□□ 0.24
VAPBO95292 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.55■□□□□ 0.24
VAPBO95292 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.55■□□□□ 0.24
VAPBO95292 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.55■□□□□ 0.24
VAPBO95292 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.55■□□□□ 0.24
VAPBO95292 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.55■□□□□ 0.24
VAPBO95292 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VAPBO95292 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.54■□□□□ 0.24
VAPBO95292 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VAPBO95292 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
VAPBO95292 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VAPBO95292 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VAPBO95292 AC104109.2-201ENST00000602919 1418 ntBASIC16.54■□□□□ 0.24
VAPBO95292 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VAPBO95292 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VAPBO95292 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VAPBO95292 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
VAPBO95292 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VAPBO95292 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VAPBO95292 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VAPBO95292 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.54■□□□□ 0.24
VAPBO95292 AC005622.1-201ENST00000636801 1703 ntBASIC16.54■□□□□ 0.24
VAPBO95292 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VAPBO95292 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms