Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.54■□□□□ 0.24
RFPL1O75677 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RFPL1O75677 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFPL1O75677 PI4KAP1-204ENST00000612579 1703 ntBASIC16.53■□□□□ 0.24
RFPL1O75677 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.53■□□□□ 0.24
RFPL1O75677 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 RPSAP43-201ENST00000402237 625 ntBASIC16.53■□□□□ 0.24
RFPL1O75677 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.53■□□□□ 0.24
RFPL1O75677 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.53■□□□□ 0.24
RFPL1O75677 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.53■□□□□ 0.24
RFPL1O75677 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.53■□□□□ 0.24
RFPL1O75677 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RFPL1O75677 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RFPL1O75677 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RFPL1O75677 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.53■□□□□ 0.24
RFPL1O75677 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.53■□□□□ 0.24
RFPL1O75677 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.53■□□□□ 0.24
RFPL1O75677 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.53■□□□□ 0.24
RFPL1O75677 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.53■□□□□ 0.24
RFPL1O75677 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFPL1O75677 AC144831.1-201ENST00000573312 2656 ntBASIC16.53■□□□□ 0.24
RFPL1O75677 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.52■□□□□ 0.24
RFPL1O75677 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.52■□□□□ 0.24
RFPL1O75677 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.52■□□□□ 0.24
RFPL1O75677 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.52■□□□□ 0.24
RFPL1O75677 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RFPL1O75677 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.52■□□□□ 0.24
RFPL1O75677 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.52■□□□□ 0.24
RFPL1O75677 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.52■□□□□ 0.24
RFPL1O75677 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RFPL1O75677 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.52■□□□□ 0.24
RFPL1O75677 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 YBX2P1-201ENST00000394192 760 ntBASIC16.52■□□□□ 0.24
RFPL1O75677 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.52■□□□□ 0.24
RFPL1O75677 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.52■□□□□ 0.24
RFPL1O75677 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.52■□□□□ 0.24
RFPL1O75677 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFPL1O75677 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.52■□□□□ 0.24
RFPL1O75677 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.52■□□□□ 0.24
RFPL1O75677 UNC93B6-202ENST00000528242 690 ntBASIC16.52■□□□□ 0.24
RFPL1O75677 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.52■□□□□ 0.24
RFPL1O75677 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.52■□□□□ 0.24
RFPL1O75677 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.52■□□□□ 0.24
RFPL1O75677 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFPL1O75677 AL353732.1-201ENST00000569618 1459 ntBASIC16.52■□□□□ 0.23
RFPL1O75677 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFPL1O75677 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFPL1O75677 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFPL1O75677 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFPL1O75677 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.52■□□□□ 0.23
RFPL1O75677 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFPL1O75677 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.51■□□□□ 0.23
RFPL1O75677 AC069224.1-201ENST00000566372 1715 ntBASIC16.51■□□□□ 0.23
RFPL1O75677 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms