Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SPTSSB-204ENST00000617024 1292 ntBASIC17.06■□□□□ 0.32
MSI1O43347 AP001059.3-201ENST00000619053 235 ntBASIC17.06■□□□□ 0.32
MSI1O43347 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.06■□□□□ 0.32
MSI1O43347 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.06■□□□□ 0.32
MSI1O43347 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MSI1O43347 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.06■□□□□ 0.32
MSI1O43347 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.06■□□□□ 0.32
MSI1O43347 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
MSI1O43347 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.06■□□□□ 0.32
MSI1O43347 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.06■□□□□ 0.32
MSI1O43347 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
MSI1O43347 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MSI1O43347 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MSI1O43347 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.05■□□□□ 0.32
MSI1O43347 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.05■□□□□ 0.32
MSI1O43347 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.05■□□□□ 0.32
MSI1O43347 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.05■□□□□ 0.32
MSI1O43347 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.05■□□□□ 0.32
MSI1O43347 RFPL4AP1-201ENST00000530883 850 ntBASIC17.05■□□□□ 0.32
MSI1O43347 AC025678.2-201ENST00000562061 970 ntBASIC17.05■□□□□ 0.32
MSI1O43347 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.05■□□□□ 0.32
MSI1O43347 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.05■□□□□ 0.32
MSI1O43347 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.05■□□□□ 0.32
MSI1O43347 MIR6080-201ENST00000617359 66 ntBASIC17.05■□□□□ 0.32
MSI1O43347 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.05■□□□□ 0.32
MSI1O43347 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MSI1O43347 AP3S2-216ENST00000617003 1561 ntBASIC17.05■□□□□ 0.32
MSI1O43347 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.05■□□□□ 0.32
MSI1O43347 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.05■□□□□ 0.32
MSI1O43347 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MSI1O43347 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
MSI1O43347 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 AC092364.2-201ENST00000596710 2692 ntBASIC17.04■□□□□ 0.32
MSI1O43347 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 AC008677.1-201ENST00000519230 1561 ntBASIC17.04■□□□□ 0.32
MSI1O43347 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.04■□□□□ 0.32
MSI1O43347 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.04■□□□□ 0.32
MSI1O43347 AL645939.2-201ENST00000427340 991 ntBASIC17.04■□□□□ 0.32
MSI1O43347 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.04■□□□□ 0.32
MSI1O43347 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.04■□□□□ 0.32
MSI1O43347 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MSI1O43347 RARRES2P9-201ENST00000565168 469 ntBASIC17.04■□□□□ 0.32
MSI1O43347 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.04■□□□□ 0.32
MSI1O43347 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MSI1O43347 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.04■□□□□ 0.32
MSI1O43347 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.04■□□□□ 0.32
MSI1O43347 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MSI1O43347 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MSI1O43347 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.04■□□□□ 0.32
MSI1O43347 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.03■□□□□ 0.32
MSI1O43347 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.03■□□□□ 0.32
MSI1O43347 AL589702.1-201ENST00000641229 1509 ntBASIC17.03■□□□□ 0.32
MSI1O43347 ME2P1-201ENST00000426028 1970 ntBASIC17.03■□□□□ 0.32
MSI1O43347 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
MSI1O43347 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MSI1O43347 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
MSI1O43347 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms