Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CUX2O14529 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
CUX2O14529 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC27.57■■■□□ 2
CUX2O14529 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC27.57■■■□□ 2
CUX2O14529 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC27.57■■■□□ 2
CUX2O14529 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
CUX2O14529 AC134915.1-201ENST00000426461 574 ntBASIC27.57■■■□□ 2
CUX2O14529 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CUX2O14529 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC27.57■■■□□ 2
CUX2O14529 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC27.57■■■□□ 2
CUX2O14529 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC27.57■■■□□ 2
CUX2O14529 AC025279.2-201ENST00000569730 653 ntBASIC27.57■■■□□ 2
CUX2O14529 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC27.57■■■□□ 2
CUX2O14529 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC27.57■■■□□ 2
CUX2O14529 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC27.57■■■□□ 2
CUX2O14529 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC27.57■■■□□ 2
CUX2O14529 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CUX2O14529 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC27.57■■■□□ 2
CUX2O14529 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
CUX2O14529 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC27.57■■■□□ 2
CUX2O14529 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC27.57■■■□□ 2
CUX2O14529 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
CUX2O14529 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC27.57■■■□□ 2
CUX2O14529 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC27.57■■■□□ 2
CUX2O14529 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC27.57■■■□□ 2
CUX2O14529 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC27.57■■■□□ 2
CUX2O14529 HOMER2P2-201ENST00000451621 847 ntBASIC27.57■■■□□ 2
CUX2O14529 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC27.57■■■□□ 2
CUX2O14529 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC27.57■■■□□ 2
CUX2O14529 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC27.57■■■□□ 2
CUX2O14529 LY6E-208ENST00000520531 490 ntTSL 2 BASIC27.57■■■□□ 2
CUX2O14529 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC27.57■■■□□ 2
CUX2O14529 AC126915.1-201ENST00000522847 1038 ntBASIC27.57■■■□□ 2
CUX2O14529 CFL1-206ENST00000527344 962 ntTSL 2 BASIC27.57■■■□□ 2
CUX2O14529 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC27.57■■■□□ 2
CUX2O14529 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CUX2O14529 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC27.56■■■□□ 2
CUX2O14529 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC27.56■■■□□ 2
CUX2O14529 CD276-201ENST00000318424 2738 ntTSL 5 BASIC27.56■■■□□ 2
CUX2O14529 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC27.56■■■□□ 2
CUX2O14529 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CUX2O14529 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CUX2O14529 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
CUX2O14529 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC27.56■■■□□ 2
CUX2O14529 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC27.56■■■□□ 2
CUX2O14529 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC27.56■■■□□ 2
CUX2O14529 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC27.56■■■□□ 2
CUX2O14529 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC27.56■■■□□ 2
CUX2O14529 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC27.56■■■□□ 2
CUX2O14529 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC27.56■■■□□ 2
CUX2O14529 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC27.56■■■□□ 2
CUX2O14529 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CUX2O14529 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CUX2O14529 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CUX2O14529 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC27.56■■■□□ 2
CUX2O14529 PC-204ENST00000524491 1714 ntTSL 2 BASIC27.56■■■□□ 2
CUX2O14529 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC27.56■■■□□ 2
CUX2O14529 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CUX2O14529 COMP-202ENST00000425807 2292 ntTSL 2 BASIC27.56■■■□□ 2
CUX2O14529 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CUX2O14529 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC27.55■■■□□ 2
CUX2O14529 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CUX2O14529 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC27.55■■■□□ 2
CUX2O14529 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
CUX2O14529 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC27.55■■■□□ 2
CUX2O14529 FOS-202ENST00000535987 1402 ntTSL 2 BASIC27.55■■■□□ 2
CUX2O14529 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 PARVG-202ENST00000415224 999 ntTSL 2 BASIC27.55■■■□□ 2
CUX2O14529 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC27.55■■■□□ 2
CUX2O14529 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC27.55■■■□□ 2
CUX2O14529 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC27.55■■■□□ 2
CUX2O14529 AP001527.2-201ENST00000614441 631 ntBASIC27.55■■■□□ 2
CUX2O14529 METTL26-214ENST00000614890 801 ntTSL 3 BASIC27.55■■■□□ 2
CUX2O14529 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC27.55■■■□□ 2
CUX2O14529 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CUX2O14529 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC27.54■■■□□ 2
CUX2O14529 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CUX2O14529 AC135050.7-201ENST00000624508 2218 ntBASIC27.54■■■□□ 2
CUX2O14529 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC27.54■■■□□ 2
CUX2O14529 AC120498.9-201ENST00000339021 3867 ntBASIC27.54■■■□□ 2
CUX2O14529 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CUX2O14529 RN7SL181P-201ENST00000462921 277 ntBASIC27.54■■■□□ 2
CUX2O14529 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC27.54■■■□□ 2
CUX2O14529 AL139011.1-202ENST00000642063 584 ntBASIC27.54■■■□□ 2
CUX2O14529 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC27.54■■■□□ 2
CUX2O14529 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CUX2O14529 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
CUX2O14529 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CUX2O14529 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CUX2O14529 AL138688.1-201ENST00000624851 1594 ntBASIC27.54■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms