Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN5O00501 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN5O00501 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN5O00501 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 ME2P1-201ENST00000426028 1970 ntBASIC17.31■□□□□ 0.36
CLDN5O00501 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN5O00501 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN5O00501 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN5O00501 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN5O00501 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CLDN5O00501 SPDYE7P-202ENST00000420373 878 ntBASIC17.3■□□□□ 0.36
CLDN5O00501 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN5O00501 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLDN5O00501 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN5O00501 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN5O00501 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN5O00501 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 PCDH8P1-201ENST00000428983 2773 ntBASIC17.3■□□□□ 0.36
CLDN5O00501 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLDN5O00501 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN5O00501 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN5O00501 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN5O00501 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN5O00501 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN5O00501 HMGN1P19-201ENST00000436976 333 ntBASIC17.29■□□□□ 0.36
CLDN5O00501 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN5O00501 KLF2P3-201ENST00000451977 1087 ntBASIC17.29■□□□□ 0.36
CLDN5O00501 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN5O00501 AC125807.1-201ENST00000483097 614 ntBASIC17.29■□□□□ 0.36
CLDN5O00501 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
CLDN5O00501 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN5O00501 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN5O00501 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLDN5O00501 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN5O00501 AC015911.4-201ENST00000588022 1070 ntBASIC17.29■□□□□ 0.36
CLDN5O00501 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN5O00501 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN5O00501 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN5O00501 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CLDN5O00501 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLDN5O00501 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN5O00501 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLDN5O00501 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN5O00501 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN5O00501 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN5O00501 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLDN5O00501 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 AC084018.2-201ENST00000613093 2607 ntBASIC17.28■□□□□ 0.36
CLDN5O00501 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN5O00501 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN5O00501 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN5O00501 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLDN5O00501 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN5O00501 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN5O00501 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN5O00501 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN5O00501 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms