Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.16■□□□□ 0.18
CDC7O00311 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.16■□□□□ 0.18
CDC7O00311 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.16■□□□□ 0.18
CDC7O00311 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 AC004877.2-201ENST00000623941 599 ntBASIC16.16■□□□□ 0.18
CDC7O00311 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.16■□□□□ 0.18
CDC7O00311 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CDC7O00311 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
CDC7O00311 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 AC025580.3-201ENST00000617932 1424 ntBASIC16.16■□□□□ 0.18
CDC7O00311 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDC7O00311 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 BCAR1-209ENST00000546196 1340 ntBASIC16.16■□□□□ 0.18
CDC7O00311 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDC7O00311 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
CDC7O00311 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.16■□□□□ 0.18
CDC7O00311 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDC7O00311 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.16■□□□□ 0.18
CDC7O00311 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CDC7O00311 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDC7O00311 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC7O00311 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC7O00311 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC7O00311 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.15■□□□□ 0.18
CDC7O00311 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDC7O00311 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC7O00311 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC7O00311 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC7O00311 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.15■□□□□ 0.18
CDC7O00311 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.15■□□□□ 0.18
CDC7O00311 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.15■□□□□ 0.18
CDC7O00311 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDC7O00311 AL009183.1-201ENST00000603760 355 ntBASIC16.15■□□□□ 0.18
CDC7O00311 AC007064.4-201ENST00000637740 555 ntBASIC16.15■□□□□ 0.18
CDC7O00311 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDC7O00311 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.15■□□□□ 0.18
CDC7O00311 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDC7O00311 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC7O00311 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDC7O00311 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC7O00311 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC7O00311 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDC7O00311 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
CDC7O00311 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.14■□□□□ 0.18
CDC7O00311 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDC7O00311 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.14■□□□□ 0.17
CDC7O00311 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC7O00311 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.14■□□□□ 0.17
CDC7O00311 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDC7O00311 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC7O00311 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC7O00311 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC7O00311 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
CDC7O00311 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC7O00311 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC7O00311 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC7O00311 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC7O00311 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CDC7O00311 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDC7O00311 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.14■□□□□ 0.17
CDC7O00311 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.14■□□□□ 0.17
CDC7O00311 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.14■□□□□ 0.17
CDC7O00311 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.14■□□□□ 0.17
CDC7O00311 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.14■□□□□ 0.17
CDC7O00311 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC7O00311 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC7O00311 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms