Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 Z92544.3-201ENST00000624747 417 ntBASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 AL118508.1-201ENST00000613502 2345 ntBASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 AL592424.1-201ENST00000563624 1536 ntBASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 AC008677.1-201ENST00000519230 1561 ntBASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
YJEFN3A6XGL0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 RNA5SP410-201ENST00000516285 106 ntBASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 AC069262.1-201ENST00000539058 672 ntBASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 AC025678.2-201ENST00000562061 970 ntBASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.09■□□□□ 0.33
YJEFN3A6XGL0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
YJEFN3A6XGL0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 AC061975.2-201ENST00000581722 295 ntBASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.08■□□□□ 0.32
YJEFN3A6XGL0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms