Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 INTS4P1-201ENST00000438455 1935 ntBASIC17.09■□□□□ 0.33
SRRM3A6NNA2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 AC015922.1-201ENST00000421102 1152 ntBASIC17.09■□□□□ 0.33
SRRM3A6NNA2 HLA-V-201ENST00000429037 534 ntBASIC17.09■□□□□ 0.33
SRRM3A6NNA2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 ABCD1P5-201ENST00000445663 754 ntBASIC17.09■□□□□ 0.33
SRRM3A6NNA2 KRT18P2-201ENST00000447938 1258 ntBASIC17.09■□□□□ 0.33
SRRM3A6NNA2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 AC027612.4-201ENST00000605371 583 ntBASIC17.09■□□□□ 0.33
SRRM3A6NNA2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SRRM3A6NNA2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 AC023157.3-201ENST00000619086 2088 ntBASIC17.08■□□□□ 0.33
SRRM3A6NNA2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM3A6NNA2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 AC002310.6-201ENST00000624451 1377 ntBASIC17.08■□□□□ 0.32
SRRM3A6NNA2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.08■□□□□ 0.32
SRRM3A6NNA2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM3A6NNA2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms