Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.97■■□□□ 1.11
SBNO1A3KN83 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.97■■□□□ 1.11
SBNO1A3KN83 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SBNO1A3KN83 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SBNO1A3KN83 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.97■■□□□ 1.11
SBNO1A3KN83 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 AP000812.2-201ENST00000538934 718 ntBASIC21.96■■□□□ 1.11
SBNO1A3KN83 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 AC133539.2-201ENST00000604757 467 ntBASIC21.96■■□□□ 1.11
SBNO1A3KN83 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.96■■□□□ 1.11
SBNO1A3KN83 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SBNO1A3KN83 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SBNO1A3KN83 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.95■■□□□ 1.11
SBNO1A3KN83 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SBNO1A3KN83 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SBNO1A3KN83 AL645608.8-201ENST00000606034 2086 ntBASIC21.95■■□□□ 1.1
SBNO1A3KN83 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SBNO1A3KN83 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SBNO1A3KN83 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SBNO1A3KN83 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SBNO1A3KN83 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 AL603756.1-201ENST00000606511 2163 ntBASIC21.95■■□□□ 1.1
SBNO1A3KN83 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SBNO1A3KN83 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 AC099548.2-209ENST00000480264 625 ntBASIC21.95■■□□□ 1.1
SBNO1A3KN83 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SBNO1A3KN83 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 TDH-203ENST00000531764 1110 ntBASIC21.94■■□□□ 1.1
SBNO1A3KN83 AC103810.3-201ENST00000583567 96 ntBASIC21.94■■□□□ 1.1
SBNO1A3KN83 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.94■■□□□ 1.1
SBNO1A3KN83 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SBNO1A3KN83 AC006538.1-201ENST00000567905 1585 ntBASIC21.93■■□□□ 1.1
SBNO1A3KN83 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SBNO1A3KN83 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SBNO1A3KN83 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SBNO1A3KN83 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 FAM21FP-201ENST00000426241 1131 ntBASIC21.93■■□□□ 1.1
SBNO1A3KN83 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.93■■□□□ 1.1
SBNO1A3KN83 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SBNO1A3KN83 AL365330.1-201ENST00000607459 531 ntBASIC21.93■■□□□ 1.1
SBNO1A3KN83 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms