Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 MRPL3P1-201ENST00000400109 1033 ntBASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 AL031284.1-201ENST00000419297 478 ntBASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 AC009947.1-201ENST00000444350 727 ntBASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 AL513480.1-201ENST00000451731 511 ntBASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 UNC93B6-202ENST00000528242 690 ntBASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 VN2R19P-201ENST00000442399 1052 ntBASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 AL773604.1-201ENST00000617417 272 ntBASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV7S3A2A0A539 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV7S3A2A0A539 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms