Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 AC099568.2-201ENST00000609194 695 ntBASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC187A0A096LP49 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AC079776.1-201ENST00000401540 1152 ntBASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 MIR1909-201ENST00000411312 80 ntBASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 MYCLP2-201ENST00000449268 967 ntBASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 AC004461.2-201ENST00000629517 803 ntBASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC187A0A096LP49 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 AC112492.5-201ENST00000421897 457 ntBASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 TTTY23B-201ENST00000442790 549 ntBASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 AL139010.1-201ENST00000454878 894 ntBASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms