Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB3Q9Y5G1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB3Q9Y5G1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
PCDHGB3Q9Y5G1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB3Q9Y5G1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB3Q9Y5G1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHGB3Q9Y5G1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHGB3Q9Y5G1 AL139125.2-201ENST00000623134 1869 ntBASIC22.36■■□□□ 1.17
PCDHGB3Q9Y5G1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHGB3Q9Y5G1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB3Q9Y5G1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB3Q9Y5G1 AC007029.1-201ENST00000604183 313 ntBASIC22.35■■□□□ 1.17
PCDHGB3Q9Y5G1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB3Q9Y5G1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB3Q9Y5G1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHGB3Q9Y5G1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGB3Q9Y5G1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB3Q9Y5G1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PCDHGB3Q9Y5G1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB3Q9Y5G1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB3Q9Y5G1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB3Q9Y5G1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGB3Q9Y5G1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PCDHGB3Q9Y5G1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHGB3Q9Y5G1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
PCDHGB3Q9Y5G1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PCDHGB3Q9Y5G1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGB3Q9Y5G1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGB3Q9Y5G1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB3Q9Y5G1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB3Q9Y5G1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB3Q9Y5G1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDHGB3Q9Y5G1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB3Q9Y5G1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGB3Q9Y5G1 AC096887.2-201ENST00000623443 1957 ntBASIC22.32■■□□□ 1.16
PCDHGB3Q9Y5G1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHGB3Q9Y5G1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGB3Q9Y5G1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PCDHGB3Q9Y5G1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB3Q9Y5G1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB3Q9Y5G1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB3Q9Y5G1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB3Q9Y5G1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB3Q9Y5G1 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGB3Q9Y5G1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB3Q9Y5G1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGB3Q9Y5G1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB3Q9Y5G1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PCDHGB3Q9Y5G1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB3Q9Y5G1 AC093536.1-201ENST00000569153 554 ntBASIC22.3■■□□□ 1.16
PCDHGB3Q9Y5G1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGB3Q9Y5G1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGB3Q9Y5G1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGB3Q9Y5G1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB3Q9Y5G1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB3Q9Y5G1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGB3Q9Y5G1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB3Q9Y5G1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGB3Q9Y5G1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
PCDHGB3Q9Y5G1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
PCDHGB3Q9Y5G1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGB3Q9Y5G1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB3Q9Y5G1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB3Q9Y5G1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PCDHGB3Q9Y5G1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB3Q9Y5G1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGB3Q9Y5G1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGB3Q9Y5G1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB3Q9Y5G1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB3Q9Y5G1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB3Q9Y5G1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB3Q9Y5G1 KRT18P60-201ENST00000312876 1297 ntBASIC22.27■■□□□ 1.16
PCDHGB3Q9Y5G1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGB3Q9Y5G1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGB3Q9Y5G1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGB3Q9Y5G1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
PCDHGB3Q9Y5G1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGB3Q9Y5G1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGB3Q9Y5G1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB3Q9Y5G1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
PCDHGB3Q9Y5G1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB3Q9Y5G1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.26■■□□□ 1.15
PCDHGB3Q9Y5G1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB3Q9Y5G1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGB3Q9Y5G1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGB3Q9Y5G1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 AC097639.1-201ENST00000565519 1891 ntBASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGB3Q9Y5G1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB3Q9Y5G1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB3Q9Y5G1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGB3Q9Y5G1 TSPY13P-201ENST00000338964 914 ntBASIC22.24■■□□□ 1.15
PCDHGB3Q9Y5G1 KRT18P10-201ENST00000388836 1287 ntBASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms