Protein–RNA interactions for Protein: Q9Y2V3

RAX, Retinal homeobox protein Rx, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAXQ9Y2V3 AL139393.2-201ENST00000608721 2025 ntBASIC22.45■■□□□ 1.18
RAXQ9Y2V3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAXQ9Y2V3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAXQ9Y2V3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.45■■□□□ 1.18
RAXQ9Y2V3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAXQ9Y2V3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.44■■□□□ 1.18
RAXQ9Y2V3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAXQ9Y2V3 AC097381.1-201ENST00000429019 1296 ntBASIC22.44■■□□□ 1.18
RAXQ9Y2V3 AC024257.2-201ENST00000549699 147 ntBASIC22.44■■□□□ 1.18
RAXQ9Y2V3 AC087623.3-201ENST00000607047 1098 ntBASIC22.44■■□□□ 1.18
RAXQ9Y2V3 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.44■■□□□ 1.18
RAXQ9Y2V3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.43■■□□□ 1.18
RAXQ9Y2V3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RAXQ9Y2V3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
RAXQ9Y2V3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RAXQ9Y2V3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.41■■□□□ 1.18
RAXQ9Y2V3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAXQ9Y2V3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAXQ9Y2V3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RAXQ9Y2V3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAXQ9Y2V3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAXQ9Y2V3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAXQ9Y2V3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAXQ9Y2V3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAXQ9Y2V3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RAXQ9Y2V3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAXQ9Y2V3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.4■■□□□ 1.18
RAXQ9Y2V3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
RAXQ9Y2V3 AF213884.3-201ENST00000563833 479 ntBASIC22.4■■□□□ 1.18
RAXQ9Y2V3 AL136967.2-201ENST00000623968 743 ntBASIC22.4■■□□□ 1.18
RAXQ9Y2V3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAXQ9Y2V3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAXQ9Y2V3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAXQ9Y2V3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.39■■□□□ 1.17
RAXQ9Y2V3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAXQ9Y2V3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAXQ9Y2V3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAXQ9Y2V3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAXQ9Y2V3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.38■■□□□ 1.17
RAXQ9Y2V3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.38■■□□□ 1.17
RAXQ9Y2V3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
RAXQ9Y2V3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RAXQ9Y2V3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAXQ9Y2V3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAXQ9Y2V3 AC090192.1-201ENST00000517740 490 ntBASIC22.37■■□□□ 1.17
RAXQ9Y2V3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAXQ9Y2V3 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.37■■□□□ 1.17
RAXQ9Y2V3 AC011551.1-201ENST00000614101 683 ntBASIC22.37■■□□□ 1.17
RAXQ9Y2V3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RAXQ9Y2V3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAXQ9Y2V3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAXQ9Y2V3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAXQ9Y2V3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RAXQ9Y2V3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAXQ9Y2V3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.36■■□□□ 1.17
RAXQ9Y2V3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAXQ9Y2V3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAXQ9Y2V3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RAXQ9Y2V3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
RAXQ9Y2V3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAXQ9Y2V3 SRD5A1P1-201ENST00000442297 786 ntBASIC22.34■■□□□ 1.17
RAXQ9Y2V3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.34■■□□□ 1.17
RAXQ9Y2V3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
RAXQ9Y2V3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
RAXQ9Y2V3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAXQ9Y2V3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAXQ9Y2V3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
RAXQ9Y2V3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.33■■□□□ 1.17
RAXQ9Y2V3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAXQ9Y2V3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.33■■□□□ 1.17
RAXQ9Y2V3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.33■■□□□ 1.17
RAXQ9Y2V3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAXQ9Y2V3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAXQ9Y2V3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.32■■□□□ 1.16
RAXQ9Y2V3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.32■■□□□ 1.16
RAXQ9Y2V3 MIR939-201ENST00000401314 82 ntBASIC22.32■■□□□ 1.16
RAXQ9Y2V3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.32■■□□□ 1.16
RAXQ9Y2V3 RARRES2P11-201ENST00000635158 484 ntBASIC22.32■■□□□ 1.16
RAXQ9Y2V3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAXQ9Y2V3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAXQ9Y2V3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAXQ9Y2V3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAXQ9Y2V3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAXQ9Y2V3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.31■■□□□ 1.16
RAXQ9Y2V3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAXQ9Y2V3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.31■■□□□ 1.16
RAXQ9Y2V3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAXQ9Y2V3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RAXQ9Y2V3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.3■■□□□ 1.16
RAXQ9Y2V3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.3■■□□□ 1.16
RAXQ9Y2V3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAXQ9Y2V3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAXQ9Y2V3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.29■■□□□ 1.16
RAXQ9Y2V3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAXQ9Y2V3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAXQ9Y2V3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAXQ9Y2V3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.29■■□□□ 1.16
RAXQ9Y2V3 AP001330.3-201ENST00000520123 633 ntBASIC22.29■■□□□ 1.16
RAXQ9Y2V3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.29■■□□□ 1.16
RAXQ9Y2V3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms